Michael Alonge

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@malonge

Computational Biologist at Ohalo Genetics

RagTag. Tools for fast and flexible genome assembly scaffolding and improvement

572

RaGOO. RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag

173

CallSV. A long-read SV calling pipeline

12

ChromMatch. Assign chromosome names to a genome assembly

6

AlignmentConverters. Convert between common sequence alignment formats

6

PatchPolish. Python

5

DupCheck. Genotype putative DUPs by querying short read coverage

3

CallIntrogressions. Python

1

old_malonge.github.io. HTML

1

seqtk. Toolkit for processing sequences in FASTA/Q formats

1

T2T-Polish. Repository for the T2T CHM13 team-polishing group

1
11
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