Paris, FR

Jacques Serizay

Advanced
@js2264

Sequences & consequences

tidyCoverage. R

24

HiContacts. Analyzing Hi-C data in R with HiCExperiment objects

16

HiCExperiment. Importing and manipulating Hi-C data in R

13

VplotR. R package to easily generate "V-plots" of paired-end sequencing data over regions of interest

11

OHCA. Orchestrating Hi-C analysis with Bioconductor

11

BiocBook. R

7

periodicDNA. periodicDNA R package

6

tinyMapper. Versatile "quick'n'dirty" mapper for genome-wide assays (e.g. ChIP-seq, ATAC-seq, RNA-seq, ...)

6

EBI_multiOmics_2020. Multi-omics data integration project designed and taught for the EMBL/EBI course: Introduction to Multiomics Data Integration and Visualisation (2020)

3

Bioc2024tidyworkshop. Repository for the Bioc2024 workshop on manipulating genomic data the tidy way.

3

DNAZooData. Gateway package to DNA Zoo-provided Hi-C maps and genome assemblies

2

GenomicCoordinates. R

2

BiocBook.tidyomics. BiocBook

2

HiCool. Processing Hi-C raw data within R

2

fourDNData. Gateway package to 4DN-provided Hi-C maps and derived genomic files

2

scATACseq-workshop. HTML

1

js2264.github.io. Personal website

1

OHCA.Bioc2023. Package demo for Bioconductor Conference 2023

1

scRNAseq_Physalia_2024. SCSS

1

scRNAseq_Physalia_2025. SCSS

1
20
Apply