Chris Ruis

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@chrisruis

MutTui. MutTui pipeline to reconstruct mutational spectra for bacterial and viral datasets

35

bammix. Summarise nucleotide counts at a set of positions in a BAM file to search for mixtures

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SARS-CoV-2_lineage_spectra. Mutational spectra for SARS-CoV-2 lineages

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tree_scripts. Scripts to extract information from trees and tree distributions

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Herts_birds. JavaScript

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Bayesian_phylogenetics. Materials for Bayesian phylogenetics tutorial

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DCC_clade_emergence. Scripts used in DCC clade emergence manuscript

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Mpox_global. Global genomic surveillance of monkeypox virus

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