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Chris Ruis

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MutTui. MutTui pipeline to reconstruct mutational spectra for bacterial and viral datasets

35

bammix. Summarise nucleotide counts at a set of positions in a BAM file to search for mixtures

13

SARS-CoV-2_lineage_spectra. Mutational spectra for SARS-CoV-2 lineages

4

tree_scripts. Scripts to extract information from trees and tree distributions

4

Herts_birds. JavaScript

2

Bayesian_phylogenetics. Materials for Bayesian phylogenetics tutorial

2

DCC_clade_emergence. Scripts used in DCC clade emergence manuscript

1

Mpox_global. Global genomic surveillance of monkeypox virus

1