Yoav Ram

markx. Markdown editor for scientific writing. Batteries included.

CS1001.py. Recitation notebooks for Extended Introduction to Computer Science with Python as Tel-Aviv University

DataSciPy. Data Science with Python

Py4Eng. Python for Engineers

SciComPy. An introduction to Scientific Computing with Python, an advanced course for computer science students at IDC Herzliya

curveball. Predicting microbial growth in a mixed culture from growth curve data

Frodo. A web app for monitoring Sun Grid Engine (SGE) cluster status

UnderTheRug. Repo for "Evolution on rugged adaptive landscapes"

PyConIL2016. How to Study Evolution Using Scientific Python - PyCon Israel 2016

old-blog. My blog

PyDataSciBio. Python and Data Science for Biology undergraduates at Tel Aviv University

ipython-notebooks. My scattered Jupyter notebooks

rsvp. Quick and dirty RSVP web app

hello-citeproc. A simple citeproc-js web app

subaru. auto-sub: automatic subtitle downloader

smt_test. A simple Python simulation to test the Sumatra Simulation Management Tool

DataTalks2017. Talk about Scientific Python and Evolution | DataTalks #3 at Neura

python-matlab-bridge-1. A simple Python => MATLAB(R) interface and a matlab_magic for ipython

GrowthRatesPy. Python API for GrowthRates (Hall et al. 2014)

CompModBiol. Seminar: Computational Models in Biology, School of Computer Science, IDC Herzliya, Spring 2019

docvertme. A web UI for Docverter

goldensphinx. Build and serve Sphinx docs

BRD. Best response dynamics for male-female games

goldenarch. Serves crap. Fast.

TheoPopBiol.

thesis. My PhD thesis

manu. Everybody's a critic

mamba. Evolutionary simulations in Python

ipy-progressbar. Progressbar for both IPython Notebooks (HTML, CSS, JS) and plain terminals.

Sid. Image processing for seed images

SanJose. Adaptive social contact rates induce complex dynamics during epidemics

spidermail. Collect email addresses from websites (for academic purposes only)

sphinx-buildpack. Shell

thecitadel. Python

ultrachronic. Run parallel jobs and save results to json.gz files

Plato. Tiny web app to design microplates and download them as a dataframe CSV

CommunityEcologyProject. A project for community ecology course using Human Microbiome Project data

ml_algorithms. A didactic Python library with well-commented and annotated implementations of machine learning algorithms.