Research faculty at The University of Texas MD Anderson Cancer Center working in infectious disease genomics and computational biology
dviont. Variant calling pipeline designed for Q20+ ONT long-reads
15flyest. Oxford Nanopore Technologies (ONT) long-read assembly polishing tool
7convict. Copy Number Variant Quantification Tool
5flye_hybrid_assembly_pipeline. Consensus bacteria genome assembly pipeline using ILMN and ONT short- and long-reads
3amr-struct. Long-read assembly + read AMRFinderPlus wrapper tool that estimates gene copy number and genomic context
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