Berkeley, CA

simroux

Expert
@simroux

Virus-obsessed bioinformatician, DOE JGI Research Scientist, Deciphering the viral world via metagenomics metatranscriptomics, and other cool omics toys.

simroux.github.io

VirSorter. Source code of the VirSorter tool, also available as an App on CyVerse/iVirus (https://de.iplantcollaborative.org/de/)

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ClusterGenomes. Archive for ClusterGenomes scripts

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ICTV_VirophageSG. Data and information related to work by the ICTV Virophage Study Group

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Inovirus. Set of scripts and data used to detect putative inovirus sequences and/or taxonomically classify them.

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iphop. Python

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VirSorter2_to_Anvio. Draft script to generate Anvi'o-compatible annotation files from VirSorter2 output, for visualization of VS2 results in Anvi'o

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globalspacers_scripts. Scripts used in the global spacer project

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simroux.github.io. HTML

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