Bioinformatics Software Engineer @ Microba. PhD in Bioinformatics at Centre for Microbiome Research, QUT
aviary. A hybrid assembly and MAG recovery pipeline (and more!)
111Lorikeet. Strain resolver for metagenomics
82rosella. Metagenomic Binning Algorithm
54fftconvolve. Rust implementations of Fast Fourier Transform convolution and correlation for n-dimensional arrays
51ChIP-R. Assessing the reproducibility of proccessed ChIP-seq peaks
13fast-nnt. fast-nnt (read Fast Ent) is a simple Rust implementation of the Neighbor Net algorithm
2ftms_mapper. FT-MS + metabolomics playground
1flight. Python module handling calls to UMAP and HDBSCAN for Lorikeet and Rosella
1CoverM. Read coverage calculator for metagenomics
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