Dmitri Pervouchine

sjcount-full. Annotation-agnostic SJ counting pipeline

bam2ssj. This utility is deprecated. SJCOUNT package shall be used instead.

sjcount. sjcount light version

RIC-contacts. This package contains a pipeline for prediction of RNA-RNA contacts from RIC-seq data.

ipsa. This is IPSA package light version

ipsa-full. Integrative Pipeline for Splicing Analyses (IPSA)

irbis. A package for ultrafast detection of conserved complementary n-mers in a set of orthologous sequences

nmdnar. This is a repository of scripts for "Integrative transcriptomic analysis suggests new autoregulatory splicing events coupled with nonsense-mediated mRNA decay"

nmd. This is a repository of scripts for "Integrative transcriptomic analysis suggests new autoregulatory splicing events coupled with nonsense-mediated mRNA decay"