Mario Rodríguez Mestre

Advanced
@pentamorfico

PhD student at @RPRLab

hoodini. Magic gene-neighborhood analyses

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plasmid_network. React + Cosmograph visualization tool for exploring antiphage defense systems in plasmids from Payne, Mestre, Zheng et al 2026

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hoodini-colab. Google Colab notebook for running Hoodini gene neighborhood analysis with a nice GUI

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hoodini-viz. GPU-powered interactive gene neighborhood visualization with deck.gl and React

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phyloxonium. GPU-powered React component for interactive phylogenetic tree visualization with deck.gl

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ParseroLogan. ParseroLogan is a tool that downloads, annotates, and performs HMM-based searches on SRA contigs coming from the Logan database

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