faunus. A Framework for Metropolis Monte Carlo Simulation of Molecular Systems
72mos-hardware. Hardware registers for 8-bit retro computers like C64, MEGA65 etc.
53spheretree. Sphere-Tree Construction Toolkit (unofficial repository)
51ultimate64. Rust library for interfacing with Ultimate-64 and Ultimate-II+
34coulombgalore. C++ Library for Electrostatics
20jupyter-course. Jupyter Course
19xmgr-resurrection. Patched XMGR plotting program for 64-bit machines
15csid. cSID-light Commodore 64 SID player (clone)
14mega65-adventure. Playground for MEGA65 programming
12chemistry-notebooks. Jupyter notebooks for chemists
4mos-hardware-template. Template for projects using the mos-hardware crate
4openmm-examples. Simulation examples for OpenMM
4kirkwood-buff. Jupyter Notebook examples of Kirkwood-Buff integrals
4SI-thiocyanate. A Molecular Forcefield for Thiocyanate Anions in Water and at Interfaces
4cppsid. C++ wrapper for cSID Commodore 64 music player
4faunus-notebooks. Examples of Faunus running in Jupyter Notebooks
3rust-mos. Empowering everyone to build reliable and efficient software.
3SI-crownether-ion-binding. Counter Intuitive Electrostatics upon Metal Ion Coordination to a Receptor with Two Homotopic Binding Sites
3voronota-rs. Rust interface for Voronota-LT
3coulomb. Library for Electrolyte Solutions and Electrostatic Interactions
2mega65-libc. Simple C library for the MEGA65
2SI-Lipase-Structure-Factors. Supporting information for Anisotropic Protein-Protein Interactions in Dilute and Concentrated Solutions
2SI-qpotential. Supporting information for q-potential
2mega65-user-guide. MEGA65 User Guide
2neofaunus. Sketch for new version of Faunus (DEPRECATED)
2cppm-generator. Command-line tool for making charged, patchy Particles
2duello. Osmotic second virial coefficient (𝐵₂) and dissociation constant (𝐾𝑑) for two rigid macromolecules
1retro-display. Embedded display drivers for retro computers
1llvm-mos-template. Template for MEGA65-libc / LLVM-MOS projects
1faunus-rs. Rust version of Faunus
1eleven. Eleven interpreter implemented in Rust
1SI-betalac-lactoferrin. Lactoferrin-betalactoglobulin Association
1SI-virtual-cell-model. Osmotic Pressure via a new Virtual Cell Model
1matrix65. Matrix Mode Serial Communicator for MEGA65
1cpp_starter_project. C++ Starter Project
1SI-asynuclein-protonation. Supporting information for "Charge compensation during amyloid formation of alpha-synuclein"
1decaarginine. Supporting information for research related to deca-arginine
1corona-vs-flu. Notebook for comparing corona vs flu
1CPPM. Charged Patchy Particle Models
1SI-surfacefibrils. Supporting information for Aggregate Size Dependence of Amyloid Adsorption onto Charged Interfaces
1virial. Script to fit radial distribution functions and calculate virial coefficients
1tafelmusik. C++ library for playing C64 SID music on macOS
1SI-polarization-switching-model. Supporting information for Polarized Switching Force Field Model for Membrane Translocation
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