martinghunt

seqhiker. Genome browser 🧬👀🚀

ziplign. Simple-to-use interactive comparison of two bacterial genomes

Scaffolder-evaluation. Wrapper scripts to run genome assembly scaffolding tools and scripts to analyse the output for accuracy.

ichsm. ICanHazSequenceMetadata

slurmzy. Slurm wrapper scripts

bioinf-scripts. Python

pacbio-14-nctc-assemblies. 14 NCTC samples for testing PacBio assemblers

ushonium. usher + taxonium

pathogen-informatics-training. Jupyter Notebook

primer3tools. Design PCR primers and check uniqueness across multiple genomes