Kui Xu

kitti_object_vis. KITTI Object Visualization (Birdview, Volumetric LiDar point cloud )

awesome-cryoem. A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.

3d-deep-learning. 3D Deep Learning works

alphafold. Install alphafold on the local machine, get out of docker.

Linear-Multihead-Attention. Reproducing the Linear Multihead Attention introduced in Linformer paper (Linformer: Self-Attention with Linear Complexity)

PrismNet. Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure

3ddensenet.torch. 3D DenseNet(torch version) for ModelNet40 dataset

keras_multi_gpu. Multi-GPU training for Keras

VRmol. VRmol: an Integrative Web-Based Virtual Reality System to Explore Macromolecular Structure

pytorch_online_plotter. Online meter ploter for pytorch. Real time ploting Accuracy, Loss, mAP, AUC, Confusion Matrix

MiniBatchSVM. Mini-batch SVM / Logistic Regresion, Online learning for large scale data.

DeepCryo. Deep learning based methods for Cryo-EM density map

frustum-pointnets. Frustum PointNets for 3D Object Detection from RGB-D Data

kuixu.github.io. my page

thu_vpn_linux. Tsinghua Univ. VPN ( Linux version )

ResMap. ResMap, Compute the local resolution of 3D density maps, (support python3 and maps in variant shape)

StatisticsLearning-JunZhu. Statistics Learning Course by JunZhu

cryofold. Protein complex structure determination by structure prediction with cryo-EM density map constraints

multiGPUtask. Submit Multi-GPU Tasks in a queue with shell scripts based on NVIDIA-SMI.

conference-paper. Conference paper list and word count

StatisticalInference. Statistical Inference Course and Homework

deeplearningbook-chinese. Ian Goodfellow, Yoshua Bengio and Aaron Courville Deep Learing Book Chinese Translation

xmail. Command line email tool, notify tool, very easy-to-use. Perl and Bash shell version provide.

PyTorchZeroToAll. Python

data-science-at-the-command-line. Data Science at the Command Line

swalign. Automatically exported from code.google.com/p/swalign

dl-torch. Lua

SLIC-CryoEM. CryoEM density map Segmentation

dl-docker-cpu. An CPU version all-in-one Docker image for deep learning. Contains all the popular DL frameworks (TensorFlow, Theano, Keras, Lasagne, Torch, Caffe, etc.)

label-tomo. Label tomography images and plot

dl-setup. Instructions for setting up the software on your deep learning machine

Machine_Learning_Yearning. Machine_Learning_Yearning By Andrew Ng

oh-my-ubuntu. oh-my-ubuntu

12l-mbi. Automatically exported from code.google.com/p/12l-mbi

learning-bioinfo. Learning Bioinformatics weekly

wgan.torch. Lua

hisat. Fast spliced aligner with low memory requirements

mrcfile. Python

meituan. Parse meituan comment with picture.

CountCys. Count the number of Cys in a series of fasta formatted protein sequences

google-interview-university. A complete daily plan for studying to become a Google software engineer.

Concu. Concu : Concurrent to run optionally numbers of commamdline.

parseprobe. Automatically Parse Stellaris® Probe Designer Data using Javascript code.