Lisbon

INSA PathoGenomics

Advanced
@insapathogenomics

Bioinformatics Unit of the Portuguese National Institute of Health Dr. Ricardo Jorge (INSA),

ReporTree. A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data

50

mutation_profile. Identify the sequence context flanking SNPs of interest and screen for potential profiles/signatures of interest

10

WGS_cluster_congruence. This repository contains the scripts used for the cluster congruence analysis of multiple bioinformatics pipelines and species.

2

cml_efsa.wgs.onehealth_facilitator. A surveillance-oriented script to facilitate the deployment of the EFSA's Whole Genome Sequencing OneHealth analytical pipeline

1
4
Apply