Passionate postdoc using Python to automate synbio workflows 🤖🧬. Up for colabs so please reach out. From CPH 🇩🇰
teemi. teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platform for workflow flexibility and automated tasks, accelerating metabolic engineering. Try teemi with our Google Colab notebooks!
44Signal_peptide_project. Jupyter Notebook
2streptocad. StreptoCAD is an open-source toolbox that automates the design of genome engineering strategies in Streptomyces. It supports CRISPR-based workflows, generating primers, guide sequences, and plasmid simulations to accelerate genetic engineering and natural product discovery.
2kozak_sequences_project. Jupyter Notebook
1SignalPrimerGenerator. Jupyter Notebook
1SynBioPython. General low-level API
1ConStrain. Jupyter Notebook
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