Florian Breitwieser

pavian. 🌈 Interactive analysis of metagenomics data

krakenuniq. 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results

bamcov. :boom: Quickly calculate and visualize sequence coverage in alignment files

sankeyD3. D3 Sankey Network Graphs from R

sendsms-scripts. Android command line SMS sending scripts

hiervis. Hierarchical visualization for R/Shiny

card-krakendb. Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database

isobar. isobar - R library for the Analysis and quantitation of isobarically tagged MSMS proteomics data

thermal-camera-android. Java

d3-hiervis. :cactus: Hierarchical visualization with D3

shinyFileTree. JavaScript

taxmash. Download scripts for Mash that put taxonomic information into the reference comments

networkD3. D3 JavaScript Network Graphs from R

cheatsheets. :ledger:

comp-genomics-class. Code and examples for JHU Computational Genomics class

krakenuniq-manuscript-code. Supporting information and scripts for KrakenUniq (Breitwieser, Baker and Salzberg, 2018)

todo.txt-vim. Vim Syntax for todo.txt (todotxt.com)