Enrico R. Crema

nimbleCarbon. Models and Utility Functions for Bayesian Analyses of Radiocarbon Dates with NIMBLE

yayoi_rice_dispersal. Modelling Dispersal of Rice in Prehistoric Japan

baorista. R package for Bayesian and Frequentist Aoristic inference

cTransmission. An Approximate Bayesian Computation Framework for inferring patterns of cultural transmission from frequency data

CulturalTransmissionModel. Source codes for the paper "The effect of equilibrium assumptions on reconstructing patterns of cultural transmission from frequency data"

bayesian_spd. Data and R scripts for the manuscript 'A Bayesian approach for fitting and comparing demographic growth models of radiocarbon dates: a case study on the Jomon-Yayoi transition in Kyushu, Japan'

NeolithicKoreaDemography. Contains R Scripts and Data associated to the paper "Bayesian analyses question the role of climate in Chulmun demography" by Kim et. al

jomonPhasesAndPopulation. Data and R scripts for the manuscript "A multi-proxy inference of Jōmon population dynamics using Bayesian phase models, residential data, and summed probability distribution of 14C dates"

HERAChp.KandlerCrema. This package contains a set of R functions that enables the reproduction of the analysis and associated figures for the book chapter Analysing cultural frequency data: neutral theory by Anne Kandler and Enrico Crema for the volume Handbook of Evolutionary Research in Archaeology, edited by Anna Prentiss. The package contains two main functions for simulating cultural transmission:

objectmediated_transmission. R scripts and Supplementary Material for the Manuscript "How cultural transmission through objects impacts inferences about cultural evolution"

diffusionCurve. Data and R scripts for the paper 'Modelling Diffusion of Innovation Curves using Radiocarbon Data'

rcarbon_paper_esm. ESM for the manuscript "Inference from large sets of radiocarbon dates: software and methods"

JAS2017_spatialSPD. Scripts for reproducing analysis and figures on the paper "Spatio-temporal approaches to archaeological radiocarbon dates"

c14demoreview. R

beyond_aoristic. Data and R scripts for the paper 'A Bayesian alternative for Aoristic analyses in Archaeology'

Lundy_et_al_2024. R

VIM-R-IDE-Vim_Config. :heart: A perfect R integration with vim :heart:

repunitprobs. Source code and R scripts for the manuscript "Modifiable reporting unit problems and time series of long-term human activity"

Jomon_SPD_Comparison. Source Codes, Scripts, and Data for the paper "Summed Probability Distribution of 14C Dates suggest divergence in the population dynamics of Central and Northern Japan during the Jomon Period"

japan_c14db. R scripts for the cleaning and the translation of the National Museum of Japanese History Radiocarbon Database

nimbleCarbon_docker. Docker testing for nimbleCarbon

yayoi_demo. Data and R scripts for the paper 'Regional demographic responses to the arrival of rice farming in prehistoric Japan'

tutorials. HTML

bookchapter_culturalevolution_2019. Scripts and Code to accompany book chapter in the upcoming Handbook of Evolutionary Research in Archaeology edited by A.Prentiss

AHMnimble. Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE

JAGSExamples. Examples of statistical models implemented using JAGS