Damien Farrell

pandastable. Table analysis in Tkinter using pandas DataFrames.

tkintertable. A pure Python library for adding tables to a Tkinter application

tablexplore. Table analysis and plotting application written in PySide2/PyQt5

epitopepredict. Python package and command line tool for epitope prediction

teaching. scripts and notes for learning

smallrnaseq. small rna-seq analysis package

pybioviz. bioinformatics visualization tools with pyviz/bokeh

pathogenie. Desktop tool for microbial genome annotation and gene detection

snipgenie. command line and desktop tool for microbial variant calling

epitopemap. A web application for visualizing MHC binding predictions

learnct. Java CT Simulation

dmnfarrell.github.io. my pages

mtbc_analyses. Code for genomics analysis of MTBC locii.

peat. PEAT is a suite of programs for capturing, analyzing and predicting biophysical characteristics of proteins

mtbdiff. Characterization of Mycobacterium tuberculosis complex species using mummer and nucdiff

gordon-group. scripts and data for gordon group papers

btbabm. Agent based model for bovine TB spread in herds

tracebtb. M.bovis WGS surveillance tool.

binderapps. bokeh binder apps

podcast-example. Example jekyll podcast site

batchfilerename. Batch file renaming utility written in Python