Peigen Chen

Intermediate
@chenpg2

H5ad2Seuratv5. A comprehensive toolkit for converting AnnData objects (h5ad files) to Seurat objects, designed for seamless integration between Python-based scanpy workflows and R-based Seurat analysis pipelines.

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RNAseq-CLI. The pipeline automates the steps from raw FASTQ files to a gene count matrix, leveraging parallel processing to significantly speed up the analysis of multiple samples.

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Seurat2AnnData. Conver Seurat object to AnnData object

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