Tessa Pierce Ward

MakeMyTranscriptome. assemble, annotate, and assess transcriptomes in a single step

2020-flexible-targets-snakemake. minimal example to demonstrate flexible targeting in snakemake

bluegenes.github.io. A responsive Jekyll theme with clean typography and support for large full page images.

2022-paper-protein-kmers. HTML

2020-latex-gep. HTML

thumper. Thumper: One of the types of stills used to accomplish the second distillation of American whiskey. It effectively removes impurities and concentrates the alcohol even further. “Low wines” go in; “high wines” come out. Thumpers differ from doublers in that the low wines enter a thumper as vapors that are bubbled through water, causing the stills to make a thumping sound; a doubler makes no distinctive noise since the low wines enter in condensed, liquid form.

sourmash_plugin_sra_download. Python

2020-dist-compare. Jupyter Notebook

2020-distance-compare. Jupyter Notebook

evolve_reseq. Scripts for Evolve & Resequence project

2019-burgers-shrooms. Jupyter Notebook

2019-protein-work. Python

2018-test_datasets. download small testing datasets useful for assessing tool functionality, e.g. jaccard similarity over species at increasing evol. distances

2020-test-sencha. Jupyter Notebook