I am a computational biologist with a background in electrical engineering and statistical signal processing.
Making-elegant-Matlab-figures. A repository comprising multiple functions for making elegant publication-quality figures in MATLAB
54Orthogonal-Clustering. A Bayesian method which utilises the rich structure embedded in the sensing matrix for fast sparse signal recovery
11RocaSec. RocaSec: A standalone GUI-based package for robust co-evolutionary analysis of proteins
4MPF-BML-GUI. Minimum Probability Flow-Boltzmann Machine Learning (MPF-BML) standalone GUI-based application for the inference of maximum entropy distribution parameters
4PV-vp1. Software for inferring the intrinsic fitness landscape of poliovirus capsid protein (vp1) and comparing it with that of analogous proteins in HIV
2RoCA. Software for identifying co-evolutionary sectors in proteins using RoCA
2HCV-E2. Software for in silico identification of immunologically-vulnerable regions of the HCV E2 glycoprotein and broadly neutralizing antibodies that target them
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