UriNeri

Expert
@UriNeri

Meta/viromics, Postdoc @ JGI Former PhD student @ Gophna lab @ TAU

rolypoly. RNA virus analysis toolkit

21

RVMT. Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.

12

gff2parquet. Utility CLI for handling GFF files (incl. converting to parquet)

4

ColabScan. Making it easier for non-bioinfos to search their data for RdRps

2

polars-dovmed. polars powered text search and extraction from NCBI's PubMed Central Open Access subset converted to parquet

2

LSV. Scripts and code used in the analyses of Haloferax volcanii 48N lemon-shaped virus

1

spacer_matching_bench. Jupyter Notebook

1

doi2bib. vibe coded chrome extension

1

bbmapy. A Python wrapper for BBTools. For the actual bbmap repo, see https://github.com/bbushnell/BBTools

1

biofaster. Jupyter Notebook

1

biofaster. FASTQ parser/streamer bencmark

1

pyraseq. paraseq entry for biofaster, with an attempted python example

1
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