California

Elizabeth Tseng

Elite
@Magdoll

Personal repository. Many of the repos here are developer tools for processing PacBio Iso-Seq data. They are not officially supported. Use at your own risk.

cDNA_Cupcake. Miscellaneous collection of Python and R scripts for processing Iso-Seq data

283

Cogent. Coding Genome Reconstruction using Iso-Seq data

60

SQANTI2. SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3

38

MagPhase. Phasing for metagenomics using PacBio long reads

16

AAV. Scripts for analyzing PacBio AAV sequences

15

CoSA. Coronavirus (SARS-Cov-2) sequencing analysis

10

ECE. Finding Extremely Conserved Elements (ECE) from multiple species alignments

5

images_public. R

3
8
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