LucaGroup

LucaOne. The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.

LucaOneTasks. The project of the downstream tasks based on LucaOne's Embedding.

LucaVirus. LucaVirus: Modeling the Evolutionary and Functional Landscape of Viruses with a Unified Genome-Protein Language Model

LucaOneApp. LucaOne’s representational inference code. Use this project for embedding inference.

LucaVirusTasks. The project of the downstream tasks based on LucaVirus.

LucaPCycle. We developed a dual-channel model named LucaPCycle, based on the raw sequence and protein language large models, to predict whether a protein sequence has phosphate-solubilizing functionality and its specific type among the 31 fine-grained functions.

LucaProt. LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein function.

AMANet. KDD '20: Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining: Attention and Memory-Augmented Networks for Dual-View Sequential Learning