Oslo, Norway

Ola Brynildsrud

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@AdmiralenOla

Scoary. Pan-genome wide association studies

221

GlobalL4scripts. A collection of scripts used for the global L4 MTB phylogeography paper

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PuppetMaster. Tools for manipulating sequencing data, multiple sequence alignments and phylogenetic trees

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Simulate_pan_genome. Simulates a pan-genome

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snp-dists. Pairwise SNP distance matrix from a FASTA sequence alignment

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pooledsampling-covid-simulation. Estimating the effect of pooled sampling in testing for Covid-19 through simulations in R

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clean_mlst_results. Simple script for cleaning and collating MLST result files

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big-list-of-naughty-strings. The Big List of Naughty Strings is a list of strings which have a high probability of causing issues when used as user-input data.

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