Y Jing

WorldFoundry. Unified World Model Inference & Evaluation Infrastructure

WorldModelLens. Python

GenDSA-V2. Python

GenDSA. [Nature Medicine, 2025 & Med (Cell Press), 2024] Large-scale Pretrained Frame Generative Model Enables Real-Time Low-Dose DSA Imaging: an AI System Development and Multicenter Validation Study

SQUALL-release. Integrating Histology with Spatial Molecular Programs Using a Multimodal Foundation Model

path2space-companion. Companion code for Shulman et al., Cell 2026: AI-predicted spatial transcriptomics unlocks breast cancer biomarkers from pathology.

path2space-extended. Extended Path2Space code: analysis and downstream methods.

awesome-autoresearch. A curated list of awesome autonomous researcher frameworks

MIRA. MIRA: Medical Time Series Foundation Model for Real-World Health Data

MediGuide. TypeScript

Kosmos. Kosmos: An AI Scientist for Autonomous Discovery - An implementation and adaptation to be driven by Claude Code or API - Based on the Kosmos AI Paper - https://arxiv.org/abs/2511.02824

andrej-karpathy-skills. A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.

writing-style-skill. Transform AI-generated text into your personal voice. Skill for Claude Code / OpenCode.

humanizer. Agent skill that removes signs of AI-generated writing from text

claude-scholar. Semi-automated research assistant for academic research and software development. Supports Claude Code, Codex CLI, Kimi Code CLI, and OpenCode across ideation, coding, experiments, writing, and publication.

Auto-claude-code-research-in-sleep. ARIS ⚔️ (Auto-Research-In-Sleep) — Lightweight Markdown-only skills for autonomous ML research: cross-model review loops, idea discovery, and experiment automation. No framework, no lock-in — works with Claude Code, Codex, OpenClaw, or any LLM agent.

Awesome-AI-Scientist. This is a survey of research on AI scientists, AI researchers, AI engineers, and a series of AI-driven research studies

slime. slime is an LLM post-training framework for RL Scaling.

TFB. [PVLDB 2024 Best Paper Nomination] TFB: Towards Comprehensive and Fair Benchmarking of Time Series Forecasting Methods

autoresearch. AI agents running research on single-GPU nanochat training automatically

TSFMs.

awesome-time-series. list of papers, code, and other resources

HY-WorldPlay. HY-World 1.5: A Systematic Framework for Interactive World Modeling with Real-Time Latency and Geometric Consistency

RFormer. Official Repository for the NeurIPS 2024 paper Rough Transformers: Lightweight Continuous-Time Sequence Modelling with Path Signatures

ToolOrchestra. ToolOrchestra is an end-to-end RL training framework for orchestrating tools and agentic workflows.

Awesome-Agent-Memory. Curated systems, benchmarks, and papers etc. on memory for LLMs/MLLMs --- long-term context, retrieval, and reasoning.

titans-pytorch. Unofficial implementation of Titans, SOTA memory for transformers, in Pytorch

awesome-llm-time-series. tracking papers, datasets, and models of "large language model (LLM) for time series"

awesome-time-series-papers. An Awesome List of the latest time series papers and code from top AI venues.

Awesome-time-series. A comprehensive survey on the time series domains

nested_learning. A Reproduction of GDM's Nested Learning Paper

giga-world-0. GigaWorld-0: World Models as Data Engine to Empower Embodied AI

Awesome-Self-Evolving-Agents. [Survey] A Comprehensive Survey of Self-Evolving AI Agents: A New Paradigm Bridging Foundation Models and Lifelong Agentic Systems

llm-council. LLM Council works together to answer your hardest questions

graphiti. Build Real-Time Knowledge Graphs for AI Agents

EventTriplesExtraction. An experiment and demo-level tool for text information extraction (event-triples extraction), which can be a route to the event chain and topic graph, 基于依存句法与语义角色标注的事件三元组抽取，可用于文本理解如文档主题链，事件线等应用。

awesome_Chinese_medical_NLP. 中文医学NLP公开资源整理：术语集/语料库/词向量/预训练模型/知识图谱/命名实体识别/QA/信息抽取/模型/论文/etc

MedAgentBench. MedAgentBench: A Realistic Virtual EHR Environment to Benchmark Medical LLM Agents

AgenticRAG-Survey. Agentic-RAG explores advanced Retrieval-Augmented Generation systems enhanced with AI LLM agents.

dInfer. dInfer: An Efficient Inference Framework for Diffusion Language Models

Awesome-Interpretability-in-Large-Language-Models. This repository collects all relevant resources about interpretability in LLMs

DeepAgent. [WWW‘26 Oral🔥] DeepAgent: A General Reasoning Agent with Scalable Toolsets

Awesome-LLM-Long-Context-Modeling. 📰 Must-read papers and blogs on LLM based Long Context Modeling 🔥

A-mem. The code for NeurIPS 2025 paper "A-Mem: Agentic Memory for LLM Agents"

Awesome-Agentic-MLLMs. Agentic MLLMs

agent-distillation. Official Code Repository for the paper "Distilling LLM Agent into Small Models with Retrieval and Code Tools"

GTA1. Python

LifelongAgentBench. Code repo for "LifelongAgentBench: Evaluating LLM Agents as Lifelong Learners"

MCPBench. The evaluation benchmark on MCP servers

mcp-bench. MCP-Bench: Benchmarking Tool-Using LLM Agents with Complex Real-World Tasks via MCP Servers

text_or_pixels. Codebase for EMNLP 2025 Findings paper "Text or Pixels? Evaluating Efficiency and Understanding of LLMs with Visual Text Inputs"

LightMem. [ICLR 2026] LightMem: Lightweight and Efficient Memory-Augmented Generation

gem. A Gym for Agentic LLMs

DeepSeek-OCR. Contexts Optical Compression

uni2ts. Unified Training of Universal Time Series Forecasting Transformers

Awesome-AgenticLLM-RL-Papers.

deepconf. DeepConf: Deep Think with Confidence

Embodied-AI-Guide. [Lumina具身智能社区] 具身智能技术指南 Embodied-AI-Guide

Awesome-GraphRAG. Awesome-GraphRAG: A curated list of resources (surveys, papers, benchmarks, and opensource projects) on graph-based retrieval-augmented generation.

langchain. The agent engineering platform.

GWM. [ICML 2025]"Graph World Model", Tao Feng, Yexin Wu, Guanyu Lin, Jiaxuan You

timesfm. TimesFM (Time Series Foundation Model) is a pretrained time-series foundation model developed by Google Research for time-series forecasting.

Medical-Graph-RAG. A Graph RAG System for Evidenced-based Medical Information Retrieval [ACL 2025]

RD-Agent. Research and development (R&D) is crucial for the enhancement of industrial productivity, especially in the AI era, where the core aspects of R&D are mainly focused on data and models. We are committed to automating these high-value generic R&D processes through R&D-Agent, which lets AI drive data-driven AI. 🔗https://aka.ms/RD-Agent-Tech-Report

information_flow. Jupyter Notebook

DLLM-Survey. [Arxiv] Discrete Diffusion in Large Language and Multimodal Models: A Survey

Reasoning-SFT. SFT of Reasoning LLMs with Megatron-LM

TxGNN. TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

Isaac-GR00T. NVIDIA Isaac GR00T N1.7 - A Foundation Model for Generalist Robots.

legged-loco. Low-level locomotion policy training in Isaac Lab

openpi. Python

VeBrain. Visual Embodied Brain: Let Multimodal Large Language Models See, Think, and Control in Spaces

vjepa2. PyTorch code and models for VJEPA2 self-supervised learning from video.

Awesome-Unified-Multimodal-Models. Awesome Unified Multimodal Models

KG-LLM-Papers. [Paper List] Papers integrating knowledge graphs (KGs) and large language models (LLMs)

Adversarial_Examples_Papers. A list of recent papers about adversarial learning

IEAP. [NeurIPS 2025] IEAP: Image Editing As Programs with Diffusion Models

One-Shot-RLVR. [NeurIPS 2025] Reinforcement Learning for Reasoning in Large Language Models with One Training Example

CrimeKgAssitant. Crime assistant including crime type prediction and crime consult service based on nlp methods and crime kg,罪名法务智能项目,内容包括856项罪名知识图谱, 基于280万罪名训练库的罪名预测,基于20W法务问答对的13类问题分类与法律资讯问答功能.

DPTS. Official implementation of Dynamic Parallel Tree Search for accelerating LLM reasoning with test-time parallel search.

LLaDA. Official PyTorch implementation for "Large Language Diffusion Models"

GraphRouter. [ICLR 2025] "GraphRouter: A Graph-based Router for LLM Selections", Tao Feng, Yanzhen Shen, Jiaxuan You

one-shot-em. One-shot Entropy Minimization

Paper2Poster. [NeurIPS 2025] Open-source Multi-agent Poster Generation from Papers

Minitron. A family of compressed models obtained via pruning and knowledge distillation

MiniPLM. [ICLR 2025] MiniPLM: Knowledge Distillation for Pre-Training Language Models

Dimple. Dimple, the first Discrete Diffusion Multimodal Large Language Model

Medical_LVLM_Sycophancy. Python

ContexualDynamicMapping. Offical code for "Enhancing Cross-Tokenizer Knowledge Distillation with Contextual Dynamical Mapping"

O3-LLM-UNLEARNING. Python

DSKD. Repo for the EMNLP'24 Paper "Dual-Space Knowledge Distillation for Large Language Models". A general white-box KD framework for both same-tokenizer and cross-tokenizer LLM distillation.

merge-tokenizers. Package to align tokens from different tokenizations.

Multi-Level-OT. Pytorch Implementation of "Multi-Level Optimal Transport for Universal Cross-Tokenizer Knowledge Distillation on Language Models", AAAI 2025

FuseAI. FuseAI Project

FlanT5-CoT-Specialization. Implementation of ICML 23 Paper: Specializing Smaller Language Models towards Multi-Step Reasoning.

arxiv-sanity-lite. arxiv-sanity lite: tag arxiv papers of interest get recommendations of similar papers in a nice UI using SVMs over tfidf feature vectors based on paper abstracts.

ChineseMedicalQA. 基于中医药知识图谱智能问答

Search-R1. Search-R1: An Efficient, Scalable RL Training Framework for Reasoning & Search Engine Calling interleaved LLM based on veRL

Awesome-GenAI-Unlearning.

RAP. Code for Retrieval-Augmented Perception （ICML 2025)

awesome-llm-unlearning. A resource repository for machine unlearning in large language models

PERMU. Python

Awesome-Knowledge-Distillation-of-LLMs. This repository collects papers for "A Survey on Knowledge Distillation of Large Language Models". We break down KD into Knowledge Elicitation and Distillation Algorithms, and explore the Skill & Vertical Distillation of LLMs.

Graphing-the-Face-of-3D-Beauty.

textgrad. TextGrad: Automatic ''Differentiation'' via Text -- using large language models to backpropagate textual gradients. Published in Nature.

Awesome-Efficient-Reasoning-LLMs. [TMLR 2025] Stop Overthinking: A Survey on Efficient Reasoning for Large Language Models

Awesome-Efficient-Reasoning-Models. [TMLR 2025] Efficient Reasoning Models: A Survey

Awesome-Efficient-Reasoning. Paper list for Efficient Reasoning.

Awesome-Multimodal-Large-Language-Models. 🔥Awesome Multimodal Large Language Models Paper List

Open-R1-Video. ✨First Open-Source R1-like Video-LLM [2025/02/18]

lmm-r1. Extend OpenRLHF to support LMM RL training for reproduction of DeepSeek-R1 on multimodal tasks.

ProcessBench. Official repository for ACL 2025 paper "ProcessBench: Identifying Process Errors in Mathematical Reasoning"

awesome-deepseek. DeepSeek 资料大全🔥，DeepSeek 使用，指令指南，应用开发指南，精选资源清单，更好的使用 DeepSeek 让你的生产力 10倍提升! 🚀

LLM4Chemistry. [COLING 2025]A curated paper list about LLMs for chemistry

conformal-credal-sets. Conformalized Credal Set Predictors (NeurIPS 2024)

simpleRL-reason. Simple RL training for reasoning

AIInfra. AIInfra（AI 基础设施）指AI系统从底层芯片等硬件，到上层软件栈支持AI大模型训练和推理。

RAG-Survey. Collecting awesome papers of RAG for AIGC. We propose a taxonomy of RAG foundations, enhancements, and applications in paper "Retrieval-Augmented Generation for AI-Generated Content: A Survey".

SkyThought. Sky-T1: Train your own O1 preview model within $450

DeepSeek-V3. Python

unsloth. Unsloth is a local UI for training and running Kimi K3, Gemma 4, Qwen3.6, DeepSeek, GLM and other models.

DRT. Deep Reasoning Translation (DRT) Project

CLEAR. [NeurIPS 2025] Official PyTorch implementation of paper "CLEAR: Conv-Like Linearization Revs Pre-Trained Diffusion Transformers Up".

Awesome-LLM-Self-Improvement. A curated list of awesome LLM Inference-Time Self-Improvement (ITSI, pronounced "itsy") papers from our recent survey: A Survey on Large Language Model Inference-Time Self-Improvement.

TinyFusion. [CVPR 2025 Highlight] TinyFusion: Diffusion Transformers Learned Shallow

VAR. [NeurIPS 2024 Best Paper Award][GPT beats diffusion🔥] [scaling laws in visual generation📈] Official impl. of "Visual Autoregressive Modeling: Scalable Image Generation via Next-Scale Prediction". An *ultra-simple, user-friendly yet state-of-the-art* codebase for autoregressive image generation!

awesome-llm-attributions. A Survey of Attributions for Large Language Models

o1_Reasoning_Patterns_Study. Python

OOP-eval. The first Object-Oriented Programming (OOP) Evaluation Benchmark for LLMs

vllm. A high-throughput and memory-efficient inference and serving engine for LLMs

reasoning-on-graphs. Official Implementation of ICLR 2024 paper: "Reasoning on Graphs: Faithful and Interpretable Large Language Model Reasoning"

InternVL. [CVPR 2024 Oral] InternVL Family: A Pioneering Open-Source Alternative to GPT-4o. 接近GPT-4o表现的开源多模态对话模型

Qwen3-VL. Qwen3-VL is the multimodal large language model series developed by Qwen team, Alibaba Cloud.

llm-self-correction-papers. List of papers on Self-Correction of LLMs.

Awesome-LLM-Strawberry. A collection of LLM papers, blogs, and projects, with a focus on OpenAI o1 🍓 and reasoning techniques.

awesome-o1. A bibliography and survey of the papers surrounding o1

LLaMA-O1. Large Reasoning Models

CPO. [NeurIPS 2024] The official implementation of paper: Chain of Preference Optimization: Improving Chain-of-Thought Reasoning in LLMs.

HARDMath. A new dataset of difficult graduate-level applied mathematics problems; evaluations demonstrate that leading LLMs currently exhibit low accuracy in solving these problems.

JEEBench. Repository for the code and dataset for the paper: "Have LLMs Advanced enough? Towards Harder Problem Solving Benchmarks For Large Language Models"

Qwen3. Qwen3 is the large language model series developed by Qwen team, Alibaba Cloud.

CoDe. [CVPR 2025] CoDe: Collaborative Decoding Makes Visual Auto-Regressive Modeling Efficient

Qwen-VL. The official repo of Qwen-VL (通义千问-VL) chat & pretrained large vision language model proposed by Alibaba Cloud.

Marco-o1. An Open Large Reasoning Model for Real-World Solutions

FailureLLMUnlearning. An official implementation of "Catastrophic Failure of LLM Unlearning via Quantization" (ICLR 2025)

smile. [EMNLP 2024] 中文领域心理健康对话大模型MeChat

LLaVA-CoT. [ICCV 2025] LLaVA-CoT, a visual language model capable of spontaneous, systematic reasoning

qr-code-styling. Automaticly generate your styled QR code in your web app.

Awesome-LLMs-in-Graph-tasks. A curated collection of research papers exploring the utilization of LLMs for graph-related tasks.

LLMs-from-scratch. Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

O1-Journey. O1 Replication Journey

g1. g1: Using Llama-3.1 70b on Groq to create o1-like reasoning chains

DPO. dpo算法实现

Awesome-LLM-Uncertainty-Reliability-Robustness. Awesome-LLM-Robustness: a curated list of Uncertainty, Reliability and Robustness in Large Language Models

LLM_Tree_Search. (ICML 2024) Alphazero-like Tree-Search can guide large language model decoding and training

o1_inference_scaling_laws. Replicating O1 inference-time scaling laws

awesome-monte-carlo-tree-search-papers. A curated list of Monte Carlo tree search papers with implementations.

openr. OpenR: An Open Source Framework for Advanced Reasoning with Large Language Models

Awesome-LLM-Inference. 📚A curated list of Awesome LLM/VLM Inference Papers with Codes: Flash-Attention, Paged-Attention, WINT8/4, Parallelism, etc.🎉

graphrag-accelerator. One-click deploy of a Knowledge Graph powered RAG (GraphRAG) in Azure

ChatTTS. A generative speech model for daily dialogue.

efaqa-corpus-zh. ❤️Emotional First Aid Dataset, 心理咨询问答、聊天机器人语料库

knowledge_graph. Convert any text to a graph of knowledge. This can be used for Graph Augmented Generation or Knowledge Graph based QnA

apiprompting. [ECCV 2024] API: Attention Prompting on Image for Large Vision-Language Models

Emu3. Next-Token Prediction is All You Need

mini-omni. open-source multimodal large language model that can hear, talk while thinking. Featuring real-time end-to-end speech input and streaming audio output conversational capabilities.

GraphRAG-Survey.

finetuned-qlora-falcon7b-medical. Finetuning of Falcon-7B LLM using QLoRA on Mental Health Conversational Dataset

BiasEval-LLM-MentalHealth. Unveiling and Mitigating Bias in Mental Health Analysis with Large Language Models

LLM-Dojo. 轻量级 LLM Post-training 框架，支持 SFT、RLVR、On-Policy KD、Guide KD 及混合训练；实现单轮/多轮 Guide 蒸馏、多教师蒸馏、Reward 混合训练与自动化数据分流👩‍🎓👨‍🎓

Hands-On-Large-Language-Models. Official code repo for the O'Reilly Book - "Hands-On Large Language Models"

maskllm-project-page. JavaScript

ReaLHF. Super-Efficient RLHF Training of LLMs with Parameter Reallocation

awesome-mechanistic-interpretability-lm-papers.

EfficientUsableVision. Repository for NSF Award: RI: Medium: Democratizing Visual AI: Enhancing Efficiency and Usability of Large Vision Models for Fostering Under-Resourced Access

ai-for-grant-writing. A curated list of resources for using LLMs to develop more competitive grant applications.

kat. [ICLR2025] Kolmogorov-Arnold Transformer

graspologic. Python package for graph statistics

MindGPT. A Mental Health conversational LLM

graphrag. A modular graph-based Retrieval-Augmented Generation (RAG) system

bigcows. Scrapes citation statistics from Google Scholar

awesome-multimodal-in-medical-imaging. A collection of resources on applications of multi-modal learning in medical imaging.

SoulChat. 中文领域心理健康对话大模型SoulChat

EmoLLM. 心理健康大模型 (LLM x Mental Health), Pre & Post-training & Dataset & Evaluation & Depoly & RAG, with InternLM / Qwen / Baichuan / DeepSeek / Mixtral / LLama / GLM series models

MentalLLaMA. This repository introduces MentaLLaMA, the first open-source instruction following large language model for interpretable mental health analysis.

Mental-LLM. The repo for paper "Mental-LLM: Leveraging Large Language Models for Mental Health Prediction via Online Text Data"

ToG. This is the official github repo of Think-on-Graph (ICLR 2024). If you are interested in our work or willing to join our research team in Shenzhen, please feel free to contact us by email (xuchengjin@idea.edu.cn)

LightCompress. [EMNLP 2024 & AAAI 2026] A powerful toolkit for compressing large models including LLMs, VLMs, and video generative models.

lgl-feature-matching. [CVPR 2022 Oral] Lifelong Graph Learning (Feature Matching)

DeeperGCN-dgl. A DGL implementation of "DeeperGCN: All You Need to Train Deeper GCNs".

Deep_GCN_Benchmarking. [TPAMI 2022] "Bag of Tricks for Training Deeper Graph Neural Networks A Comprehensive Benchmark Study" by Tianlong Chen*, Kaixiong Zhou*, Keyu Duan, Wenqing Zheng, Peihao Wang, Xia Hu, Zhangyang Wang

Mamba_State_Space_Model_Paper_List. [Mamba-Survey-2024] Paper list for State-Space-Model/Mamba and it's Applications

MindBridge. [CVPR 2024 Highlight] Official PyTorch implementation of "MindBridge: A Cross-Subject Brain Decoding Framework"

Awesome-Text-to-3D. A growing curation of Text-to-3D, Diffusion-to-3D works.

hash3D. Hash3D: Training-free Acceleration for 3D Generation

LCAT. Python

Graphormer-GD. [ICLR 2023 notable top-5%] Rethinking the Expressive Power of GNNs via Graph Biconnectivity (official implementation)

Intra-Fusion. Towards Meta-Pruning via Optimal Transport, ICLR 2024 (Spotlight)

rebasin. Replicating the Git Re-Basin paper

dissect-git-re-basin. Replicating and dissecting the git-re-basin project in one-click-replication Colabs