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Tommi Mäklin

Intermediate

@tmaklin

Computer scientist / statistician working with bacterial genomes.

bxzstr. A C++ header-only ZLib / libBZ2 / libLZMA / Zstandard wrapper.

kbo. Local alignment search with k-bounded matching statistics.

tigz. Parallel gzip decompression and compression using libdeflate and rapidgzip.

kbo-cli. Command-line interface for the kbo local aligner.

tsp-mpi. Parallel genetic algorithm for solving the travelling salesman problem.

seamat. Templatized and parallelized matrix library for c++.

kbo-gui. Graphical web user interface for the kbo local aligner built with Dioxus

cxxargs. Header-only command-line parsing library for C++11.

alignment-writer. Compact Themisto pseudoalignment files using BitMagic.

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