This is your work, valued

Berlin, Germany

Tyler Burns

Advanced
@tjburns08

I'm a classically trained biologist who learned programming and statistics thereafter. I am now a hybrid who solves problems utilizing both skill sets.

knn_sleepwalk. A wrapper around the sleepwalk package that allows for interactive knn visualizations of an embedding.

23

KnnSleepwalk. R package that allows for visualization of the KNN of an embedding compared to the KNN of the original high-dimensional data.

21

llm_single_cell_annotation. Annotate your single-cell data using a LLM directly within your R pipeline

8

cluster_stability. Some helper functions to visualize the stability of a clustering method for your single-cell data.

3

Sconify. Group CyTOF data into overlapping k-nearest neighborhoods for enhanced single-cell visualizations.

3

twitter-mining-scilit. Mining automated paper-posting bots from twitter, especially useful to determine which pre-prints are being talked about.

2

dimr_run_multiple_times. HTML

1

dimr_spectrum_single_cell. View a spectrum of dimensionality reduction embeddings for your single-cell data ranging from t-SNE like to UMAP like

1

tweet_table. Create searchable and sortable tables of the tweet histories of your favorite twitter users.

1

umap-for-cytof. My early solution to running UMAP on your flow and mass cytometry data and compare it with t-SNE. Now I use the umap package in CRAN.

1

claude-cytof-gating. Manual gating experiment with Claude Code and the Samusik dataset

1