Richard Durbin

pbwt. Implementation of Positional Burrows-Wheeler Transform for genetic data

syng. syncmer graphs, and perhaps other sorts of sequence graphs

modimizer. a toolset for fast DNA read set matching and assembly using a new type of reduced kmer

rotate. simple program to rotate a circular sequence to start at a given position or string

hexamer. find likely coding segments in DNA using composition-normalised hexamer tables

onebam. ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything

hash10x. a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly

gaffer. a GFA toolkit

phynder. likelihood calculations over a tree to support ancient DNA Y chr analysis and more

ONEsv.

alntools. utilities for processing .1aln files from FastGA, FasTAN etc.

acedb. the Sanger Institute version of the venerable genome database system

pyramus. C