Florian Rohrer

quickdraw-dataset. Documentation on how to access and use the Quick, Draw! Dataset.

openobserve. Open source observability platform for logs, metrics, traces, frontend monitoring, pipelines and LLM observability. A sophisticated, simple and highly performant alternative to Datadog, Splunk, and Elasticsearch with 140x lower storage costs and single binary deployment.

andrej-karpathy-skills. A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.

FiraCode. Free monospaced font with programming ligatures

get-shit-done. A light-weight and powerful meta-prompting, context engineering and spec-driven development system for Claude Code by TÂCHES.

ggannotate. Interactively annotate ggplots

tidytuesday. Code and plots for submissions to the #tidytuesday challenge

stat_rethinking_2026. Statistical Rethinking Course 2026

pandas-ai. Chat with your database or your datalake (SQL, CSV, parquet). PandasAI makes data analysis conversational using LLMs and RAG.

2025-advent-of-code. https://adventofcode.com/2025

grist-core. Grist is the evolution of spreadsheets.

plotly-resampler. Visualize large time series data with plotly.py

visidata. A terminal spreadsheet multitool for discovering and arranging data

harlequin. The SQL IDE for Your Terminal.

lejepa. Python

datamapplot. Creating beautiful plots of data maps

deepdiff. DeepDiff: Deep Difference and search of any Python object/data. DeepHash: Hash of any object based on its contents. Delta: Use deltas to reconstruct objects by adding deltas together.

metabase. The easy-to-use open source Business Intelligence and Embedded Analytics tool that lets everyone work with data :bar_chart:

DABEST-python. Data Analysis with Bootstrapped ESTimation

mise. dev tools, env vars, task runner

labelU. Open-source multimodal data annotation platform with AI auto-annotation support.

flet. Build realtime web, mobile and desktop apps in Python only. No frontend experience required.

kivy. Open source UI framework written in Python, running on Windows, Linux, macOS, Android and iOS

doccano. Open source annotation tool for machine learning practitioners.

act. Run your GitHub Actions locally 🚀

sample-databricks-python. An educational data engineering project template that uses Databricks as a computation engine that allows to combine engineering best practices with notebook-centric layout

release-please. generate release PRs based on the conventionalcommits.org spec

coder. Secure environments for developers and their agents

yt-dlp. A feature-rich command-line audio/video downloader

quarto-cli. Open-source scientific and technical publishing system built on Pandoc.

deepface. A Lightweight Face Recognition and Facial Attribute Analysis (Age, Gender, Emotion and Race) Library for Python

Gaga. [TMLR 2026] Gaga: Group Any Gaussians via 3D-aware Memory Bank

LAVIS. LAVIS - A One-stop Library for Language-Vision Intelligence

kotaemon. An open-source RAG-based tool for chatting with your documents.

markitdown. Python tool for converting files and office documents to Markdown.

influxdb. Scalable datastore for metrics, events, and real-time analytics

samurai. Official repository of "SAMURAI: Adapting Segment Anything Model for Zero-Shot Visual Tracking with Motion-Aware Memory"

difflogic. A Library for Differentiable Logic Gate Networks

fd. A simple, fast and user-friendly alternative to 'find'

hyperfine. A command-line benchmarking tool

GaussianAnything. High-quality and editable surfel 3D Gaussian generation through native 3D diffusion (ICLR 2025)

data-engineer-handbook. This is a repo with links to everything you'd ever want to learn about data engineering

BeatTheBookie. Betting Strategy to Beat the Bookies at Football Games

AFFiNE. There can be more than Notion and Miro. AFFiNE(pronounced [ə‘fain]) is a next-gen knowledge base that brings planning, sorting and creating all together. Privacy first, open-source, customizable and ready to use.

streamlit-highcharts-python. Streamlit Component providing Highcharts Core for Python support

highcharts-core. Python wrapper for the Highcharts Core JavaScript library

pyparsing. Python library for creating PEG parsers

brush. 3D Reconstruction for all

stealth. :rocket: Stealth - Secure, Peer-to-Peer, Private and Automateable Web Browser/Scraper/Proxy

sudoku-in-python-packaging. Sudoku solving in python packaging

supabase. The Postgres development platform. Supabase gives you a dedicated Postgres database to build your web, mobile, and AI applications.

SegmentAnything3D. [ICCV'23 Workshop] SAM3D: Segment Anything in 3D Scenes

git-remote-s3. Python

trufflehog. Find, verify, and analyze leaked credentials

gitleaks. Find secrets with Gitleaks 🔑

lucia. Authentication, simple and clean

copenhagen. A basic guideline on implementing auth for the web

ml-depth-pro. Depth Pro: Sharp Monocular Metric Depth in Less Than a Second.

PotreeConverter. Create multi res point cloud to use with potree

uptime-kuma. A fancy self-hosted monitoring tool

libLAS. C++ library and programs for reading and writing ASPRS LAS format with LiDAR data

LAStools. efficient tools for LiDAR processing

potree. WebGL point cloud viewer for large datasets

awesome-pipeline. A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

visual_anagrams. Code for the paper "Visual Anagrams: Generating Multi-View Optical Illusions with Diffusion Models"

ISBNet. ISBNet: a 3D Point Cloud Instance Segmentation Network with Instance-aware Sampling and Box-aware Dynamic Convolution (CVPR 2023)

GrowSP. 🔥GrowSP in PyTorch (CVPR 2023)

3DPC-CISS. This is the code related to "Geometry and Uncertainty-Aware 3D Point Cloud Class-Incremental Semantic Segmentation" (CVPR 2023)

pooch. A friend to fetch your data files

Open3D. Open3D: A Modern Library for 3D Data Processing

structlog. Simple, powerful, and fast logging for Python.

ray. Ray is an AI compute engine. Ray consists of a core distributed runtime and a set of AI Libraries for accelerating ML workloads.

prometheus. The Prometheus monitoring system and time series database.

gitops-template. ArgoCD based GitOps template with preconfigured Glasskube Package Manager and an example application.

CloudCompare. CloudCompare main repository

ClickHouse. ClickHouse® is a real-time analytics database management system

pykan. Kolmogorov Arnold Networks

CrossSection. Code to accompany our paper Chen and Zimmermann (2020), "Open source cross-sectional asset pricing"

magic-wormhole. get things from one computer to another, safely

croc. Easily and securely send things from one computer to another :crocodile: :package:

sherloq. An open-source digital image forensic toolset

CausalCookbook.

jailbreak_llms. [CCS'24] A dataset consists of 15,140 ChatGPT prompts from Reddit, Discord, websites, and open-source datasets (including 1,405 jailbreak prompts).

marginaleffects. R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and ML models. Conduct linear and non-linear hypothesis tests, or equivalence tests. Calculate uncertainty estimates using the delta method, bootstrapping, or simulation-based inference

awesome-mlops. :sunglasses: A curated list of awesome MLOps tools

langkit. 🔍 LangKit: An open-source toolkit for monitoring Large Language Models (LLMs). 📚 Extracts signals from prompts & responses, ensuring safety & security. 🛡️ Features include text quality, relevance metrics, & sentiment analysis. 📊 A comprehensive tool for LLM observability. 👀

sops. Simple and flexible tool for managing secrets

keycloak. Open Source Identity and Access Management For Modern Applications and Services

HTSplotter. An end-to-end data processing, analysis and visualisation tool for chemical and genetic in vitro perturbation screens

cellpose. a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

cyto-dl. Python

FriendsDontLetFriends. Friends don't let friends make certain types of data visualization - What are they and why are they bad.

xg2xg. by ex-googlers, for ex-googlers - a lookup table of similar tech & services

zoekt. Fast trigram based code search

dspguide-code. Python and Octave/MATLAB explorations of algorithms from The Scientist and Engineer's Guide to Digital Signal Processing

pyvips. python binding for libvips using cffi

IMCWorkflow. Overview repository on IMC data analysis

steinbock. A toolkit for processing multiplexed tissue images

kargo. Application lifecycle orchestration

openapi-generator. OpenAPI Generator allows generation of API client libraries (SDK generation), server stubs, documentation and configuration automatically given an OpenAPI Spec (v2, v3)

argo-cd. Declarative Continuous Deployment for Kubernetes

FizzBuzzEnterpriseEdition. FizzBuzz Enterprise Edition is a no-nonsense implementation of FizzBuzz made by serious businessmen for serious business purposes.

awesome-argo. A curated list of awesome projects and resources related to Argo (a CNCF graduated project)

fabric. Simple, Pythonic remote execution and deployment.

earthly. Super simple build framework with fast, repeatable builds and an instantly familiar syntax – like Dockerfile and Makefile had a baby.

promptfoo. Test your prompts, agents, and RAGs. Red teaming/pentesting/vulnerability scanning for AI. Compare performance of GPT, Claude, Gemini, DeepSeek, and more. Simple declarative configs with command line and CI/CD integration. Used by OpenAI and Anthropic.

cellprofiler-batch-nf. Batch execution of CellProfiler analyses using Nextflow

FastSAM. Fast Segment Anything

MetricsReloaded. Python

micro-sam. Segment Anything for Microscopy

ibis. the portable Python dataframe library

awesome-causal-inference. A curated list of causal inference libraries, resources, and applications.

no-more-secrets. A command line tool that recreates the famous data decryption effect seen in the 1992 movie Sneakers.

github-spray. :octocat: Draw on your GitHub contribution graph ░▒▓█

try. Control and manipulate a command's effects before modifying your live system

DragGAN. Official Code for DragGAN (SIGGRAPH 2023)

progress. Linux tool to show progress for cp, mv, dd, ... (formerly known as cv)

vizarr. A minimal Zarr image viewer based on Viv.

neural-tangents. Fast and Easy Infinite Neural Networks in Python

MEDIAR. (NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality Microscopy"

PlateEditor. Repository for PlateEditor, the web application allowing management of plate layout, results visualization and analysis

segment-anything. The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.

seg. Evaluation of label free cell and nuclei segmentation

cog. Containers for machine learning

cylinter. An Interactive Image Segmentation Filter for Multiplex Microscopy

Oxen. Lightning fast data version control system for large repositories of data. Feels like git, pushes and pulls like oxen.

Rath. Next generation of automated data exploratory analysis and visualization platform.

instruct-pix2pix. Python

dance. DANCE: a deep learning library and benchmark platform for single-cell analysis

chatgpt-failures. Failure archive for ChatGPT and similar models

nnUNet. Python

marp. The entrance repository of Markdown presentation ecosystem

WIPP. Web Image Processing Pipeline (WIPP)

dynamicviz. Jupyter Notebook

AdventOfCode2022. Python

commitgpt. Automatically generate commit messages using ChatGPT

Advent-of-Code. Python

aoc_2022. Python

Aoc22. Advent of Code 2022

WBC_Feature. Classification of White Blood Cells in Peripheral Smear Images

mark. Sync your markdown files with Confluence pages.

torchinfo. View model summaries in PyTorch!

awesome-open-mlops. The Fuzzy Labs guide to the universe of open source MLOps

scPerturb. scPerturb: A resource and a python/R tool for single-cell perturbation data

single-cell-tutorial. Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

engineeringladders. A framework for Engineering Managers

InterviewThis. An open source list of developer questions to ask prospective employers

stable-diffusion. A latent text-to-image diffusion model

CLAM. Open source tools for computational pathology - Nature BME

PORPOISE. Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell

diffusers. 🤗 Diffusers: State-of-the-art diffusion models for image, video, and audio generation in PyTorch.

NAFNet. The state-of-the-art image restoration model without nonlinear activation functions.

cellpainting-gallery. Cell Painting Gallery

linearsdr. Linear Sufficient Dimension Reduction methods

comcast. Simulating shitty network connections so you can build better systems.

stable-diffusion. Jupyter Notebook

napari. napari: a fast, interactive, multi-dimensional image viewer for python

GeneMutationFromHE. Gene mutation and pathway activity prediction from H&E slides

HRDA. [ECCV22] Official Implementation of HRDA: Context-Aware High-Resolution Domain-Adaptive Semantic Segmentation

Supp_BetgeRindtorff_2021. Repository for the paper "The drug-induced phenotypic landscape of colorectal cancer organoids"

cellx-predict. Explainable AI model of cell behavior

discoart. 🪩 Create Disco Diffusion artworks in one line

prettymaps. Draw pretty maps from OpenStreetMap data! Built with osmnx +matplotlib + shapely

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printf-tac-toe. tic-tac-toe in a single call to printf

tilt. Define your dev environment as code. For microservice apps on Kubernetes.

feathr. Feathr – A scalable, unified data and AI engineering platform for enterprise

deep-spectral-segmentation. [CVPR 2022] Deep Spectral Methods: A Surprisingly Strong Baseline for Unsupervised Semantic Segmentation and Localization

campa. Conditional Autoencoders for Multiplexed Pixel Analysis

perceiver-io. A PyTorch implementation of Perceiver, Perceiver IO and Perceiver AR with PyTorch Lightning scripts for distributed training

font-thicccboi. A free and open source font by Wonder Unit

memray. Memray is a memory profiler for Python

Awesome-Diffusion-Models. A collection of resources and papers on Diffusion Models

latent-diffusion. High-Resolution Image Synthesis with Latent Diffusion Models

SIMPLI. SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.

slim. Slim(toolkit): Don't change anything in your container image and minify it by up to 30x (and for compiled languages even more) making it secure too! (free and open source)

prefetch_generator. Simple package that makes your generator work in background thread

rethinking. Statistical Rethinking course and book package

chemicalx. A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)

causal-inference-visual-guides. A collection of visual guides to help applied scientists learn causal inference.

python-causality-handbook. Causal Inference for the Brave and True. A light-hearted yet rigorous approach to learning about impact estimation and causality.

causalml-feedstock. A conda-smithy repository for causalml.

redun. Yet another redundant workflow engine

cosmic-ray. Mutation testing for Python

mutmut. Mutation testing system

vicreg. VICReg official code base

EASI-FISH. Tools and scripts for EASI-FISH image data analysis

cats. CATS is a REST API Fuzzer and negative testing tool for OpenAPI endpoints. CATS automatically generates, runs and reports tests with minimum configuration and no coding effort. Tests are self-healing and do not require maintenance.

stat_rethinking_2022. Statistical Rethinking course winter 2022

Kaggle-Recursion-Cellular. https://www.kaggle.com/c/recursion-cellular-image-classification

ConvNeXt. Code release for ConvNeXt model

mae. PyTorch implementation of MAE https//arxiv.org/abs/2111.06377

dura. You shouldn't ever lose your work if you're using Git

Advent-of-Code. Advent of Code

aoc21. Python

Awesome-Visual-Transformer. Collect some papers about transformer with vision. Awesome Transformer with Computer Vision (CV)

SegFormer. Official PyTorch implementation of SegFormer

Swin-Transformer. This is an official implementation for "Swin Transformer: Hierarchical Vision Transformer using Shifted Windows".

rational_activations. Rational Activation Functions - Replacing Padé Activation Units

python_for_microscopists. https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1