Peter Edge

longshot. diploid SNV caller for error-prone reads

rust-spoa. Rust crate with bindings and interface to the SPOA library for generating consensus sequences.

longshot_study. This repository contains a Snakemake recipe to recreate the Longshot study

hapcut2. Performs haplotype assembly from genomic DNA sequence reads for a single individual using a maximum-likelihood based approach. Performs well on diverse NGS technologies, including long read data and Hi-C.

conky_wunderlist.