Shawn T O'Neil

rstackdeque. Stack and deque datatypes for R - fast and functional

immutables. Fast, flexible, and functional data structures for R via monoid-annotated finger trees.

dpl_u19. Deep Learning for Life Scientists Pilot

rstackdeque_examples. Examples and timing tests for the rstackdeque R package.

kani-utils. Streamlit-based UI for Kani LLM agents

tidytensor. Utilities for multidimensional arrays as named hierarchical structures

recursion_f16. Recursion and Dynamic Programming workshop, Fall 2016

n3cutils. [Logic Liaison Template] ML Utils: Feature Vectorization and Incremental Training in Python

SGE_Array. SGE_Parallel

opaiui. Opinionated Pydantic.AI User Interface

streamlit-kani. Streamlit-based UI for Kani LLM agents

.dotfiles. tmux, vim, zsh

discovery_index. JavaScript

apcb_second_edition. A Primer for Computational Biology, 2nd Ed.

redliner. An AI copy editor.

SimKGC. ACL 2022, SimKGC: Simple Contrastive Knowledge Graph Completion with Pre-trained Language Models

icdbot. A streamlit bot that can work with ICD codes.

handyscripts. Handy command-line scripts

covid-19-dream. COVID-19 DREAM Challenge