Nathan LaPierre

PySensemakr. Python implementation of the original R sensemakr package: https://github.com/carloscinelli/sensemakr

Metalign. Metalign: efficient alignment-based metagenomic profiling via containment min hash

metapheno. Repository for the T2D/obesity experiments run in the Metapheno paper

MsCAVIAR. MsCAVIAR identifies causal variants using GWAS summary statistics from multiple studies, e.g. trans-ethnic fine mapping

MRTwin-replication. Scripts needed to replicate the MR-Twin analysis

multiInstanceLearning. Multiple Instance Learning research code and CAMIL paper, February - August 2016

MiniScrub. De novo long read scrubbing with Minimap and Convolutional Neural Networks

isoQTL. Jupyter Notebook

GRAFT. GRAFT-Pert — GRaph-based cAusal Transfer for Perturbations

MR-Twin. Software for the MR-Twin paper ("Leveraging family data to design Mendelian Randomization that is provably robust to population stratification")

metalign_paper_replication. Scripts and files for replicating results in the metalign paper

mrsensemakr. Python

mouseGWASAnalysisPackage. Package for LOCO GWAS analysis of mouse clinical traits via pylmm

nathanrlapierrecom. My personal website