Nan Xiao

awesome-shiny-extensions. 🐝 Awesome R and Python packages offering extended UI or server components for the web framework Shiny

ggsci. 🦄 Scientific journal and sci-fi themed color palettes for ggplot2

liftr. 🐳 Containerize R Markdown documents for continuous reproducibility

r-base-shortcuts. ⚡ Base R shortcuts: A collection of lesser-known but powerful idioms and coding patterns for writing concise and fast R code

awesome-webr. 😎 A curated list of awesome resources for learning WebR, a version of the statistical language R compiled for the browser and Node.js using WebAssembly.

hugo-tanka. 📝 A minimalist, text-oriented, and performant theme for Hugo/blogdown.

protr. 🧬 Toolkit for generating various numerical features of protein sequences

hdnom. 🔮 Benchmarking and visualization toolkit for penalized Cox models

deep-learning-recipes. 🍱 R implementation for selected machine learning methods with deep learning frameworks (Keras, Tensorflow)

Rcpi. 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery

r-rust-pkgs. R packages using Rust on CRAN

stackgbm. 🌳 Stacked Gradient Boosting Machines

imgsvd. Shiny App for Image Compression via SVD

logd74. A high-quality hand-curated logD7.4 dataset of 1,130 compounds

hugo-renga. A Bootstrap-based minimalist theme for Hugo/blogdown.

gpu. 🚀 Deep Learning GPU Selector

sdml. Supervised Distance Metric Learning with R

llm-cliches. A curated collection of commonly used clichés and phrases in Large Language Models outputs

enpls. Algorithmic framework for measuring feature importance, outlier detection, model applicability evaluation, and ensemble predictive modeling with (sparse) partial least squares regressions.

msaenet. 🧲 Multi-step adaptive estimation for reducing false positive selection in sparse regressions

targetnet. Shiny Web Application for Drug Target Identification with Large-Scale Public Binding Affinities Data

nanxstats.github.io. Personal Website of Nan Xiao (deploy)

ost. 📖 Open Source Typography: A Curated Lookbook for Creative Expression

MEF. Datasets and source code for reproducing the paper 'Integrating multiple evidence sources to predict adverse drug reactions based on systems pharmacology model'.

vscode-textmate-rstheme. A light theme for Visual Studio Code inspired by the TextMate (default) theme in RStudio IDE.

dockflow. Containerize Bioconductor Workflows

tidychem. ⚗️ Tidy Chemical Data

shiny-loading-skeleton. Shiny app template with an animated, fully customizable skeleton loader

grex. Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data

OHPL. 📈 Ordered Homogeneity Pursuit Lasso for Group Variable Selection

RECA. Relevant Component Analysis for Supervised Distance Metric Learning

signify. Shiny Web Application for Making Your p-value Sound Significant

sbgr. R Client for Seven Bridges Genomics API (v1)

pdf-word-extraction. Extract meaningful words from a collection of PDF documents and count their frequencies

pkgdown.offline. 🔌 Build pkgdown websites without an internet connection

r-future-recipes. 🚀 Guides and examples for the future framework in R

rankv. Rank aggregated signal detection for VAERS data

shiny-fcp-loader. 🚧 Shiny app skeleton with a loading screen that aims to minimize the time to first contentful paint (FCP)

hugo-nanx2020. Minimalist Hugo theme built on Bootstrap 4

rmarkdown-quarto-stix2. Authoring R Markdown and Quarto PDF documents using STIX fonts