Matei David

zstr. A C++ header-only ZLib wrapper

nanocall. An Oxford Nanopore Basecaller

fast5. A C++ header-only library for reading Oxford Nanopore Fast5 files

nanocall-analysis. Nanocall analysis scripts

keymap. A Key-Value Store for GNU Make

phase-tools. A collection of programs for identifying, manipulating, and separating phase sets.

hpptools. C++ header tools

smailq. Python

tclap. Clone of the Templatized C++ Command Line Parser

interval-tree. An implementation of intrusive interval trees based on Boost Intrusive red-black trees