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napari-annotator. A lightweight plugin extending label layer control.
napari-filter-labels-by-prop. A simple napari plugin to filter labels by properties.
cellpose. a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
faim-ipa. A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
NGStackReg. NGStackReg provides a parallelized and OpenCL accelerated complete rewrite of the StackReg/TurboReg plugins.
bioio. Image reading, metadata management, and image writing for Microscopy images in Python
profile-readme-generator. 🎨 Enhance your GitHub profile with this amazing tool, which allows you to create a personalized README quickly and easily. This profile README generator is the best you'll find 🚀
qupath-extension-biop-omero. QuPath extension to work with images through OMERO's Java API (raw)
activity-timer. Activity timer powerup for Trello
qupath-extension-cellpose. an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.
Histopathology-Datasets. Ressources of histopathology datasets
openirisAPI. Python
napari. napari: a fast, interactive, multi-dimensional image viewer for python
contributed-project-templates. A repository of community-developed project templates.
ijp-kheops. Java
