J. Sebastian Paez

mkquartodocs. Is a mkdocs plugin to make reproducible documentation with quarto

timsrust_pyo3. Python bindings to access bruker mass spec data

elfragmentador. This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention time and fragmentation).

ms2ml. Helps you convert raw mass spec data into tensors!

sctree. Tree based marker finding and gating visualization for single cell rna seq data

elfragmentador-data. Python

sagegui. Rust

mFuzzOptim. A shiny implementation of the mFuzz fuzzy clustering package package

keepmeposted. bash based utility to stay updated on your mass spec

mdformat-sentencebreak. Python

stomata_detector. Python

volcano_prediction. Jupyter Notebook