Julian McGinnis

multi_contrast_inr. [MICCAI'23] Source Code for Single-subject Multi-contrast MRI Super-resolution via Implicit Neural Representations.

voreen_tools. Provides current Voreen Sources (with modifications) by Uni Münster to build voreen for PC, server or lrz cluster, including workspaces and scripts optimized for graph extraction on datasets utilized by IBBM@TUM.

stable_rank_inrs. Implementation for the Paper "Optimizing Rank for High-Fidelity Implicit Neural Representations".

large_cohort_sca_analysis. Large Cohort Spinal Cord vs Spinal Canal CSA Analysis using various methods.

vessel_graph_pipeline. This repository hosts source code for an automated voreen-based pipeline covering graph generation, post processing, atlas annotation and statistical analysis.

lipschitz-inrs. [ICLR'26] Source Code for our paper on Lipschitz regularization.

ich_segmentation. Source code for setting up training of nn-UNet based model for ICH segmentation, and the visualization of the results for the paper "Predictors and Implications of Myocardial Injury in Intracerebral Hemorrhage" by Felix Hess et al.

snp_tum_karolinska. Python