Jared Lumpe

ox-json. JSON export back end for Emacs Org mode

obsidian-spacekeys. Obsidian plugin to define hotkeys based on sequences of keypresses.

pyorg. Python library for working with Emacs org mode.

gambit. A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.

python-emacs. Python interface to GNU Emacs.

pyorg-flask. Flask app for pyorg package

org-json. Export org mode files/elements to JSON.

triarray. Python package for working with pairwise distance/similarity matrices in non-redundant format.

geodesiclm. Geodesic Levenberg-Marquardt

nbcat. View contents of Jupyter notebooks in the terminal with syntax highlighting.

babou. Implementation of the surreal numbers in Python.

TriMatrices.jl. Julia package for storing large triangular or symmetric matrices in non-redundant format.

gambit-publication. Snakemake workflow to generate figures and results from GAMBIT paper

progress-interface. Generic interface for monitoring task progress in Python.

statsnerds-pubs-2017. Stats nerds supergroup in PUBS 2017.

py-bioconductor. Python wrappers or ports for select Bioconductor packages. Because no one should have to use R.