Jannis Born

paperscraper. A bibliometrics tool for publication metadata (pubmed, arxiv, medrxiv, biorxiv, chemrxiv) and citation analyses

covid19_ultrasound. Open source lung ultrasound (LUS) data collection initiative for COVID-19.

pymed. PyMed is a Python library that provides access to PubMed. This is a user-maintained fork from the archived original.

gpxfix. A python GUI that helps you to repair the GPX file of your outdoor activity. Helpful if, e.g: (1) your device ran out of battery, (2) you lost GPS signal during the activity, (3) you forgot to unpause after having a break or (4) you forgot to start the tracking at the beginning of your activity

PennyMe. Swift code for iOS App "PennyMe"

greentastic_backend. An iOS app for transportation comparison

FacePeeper. A Deep Residual Convolutional Neural Network as Gender Classifier on an Interactive Webserver

greentastic_frontend_ios. Greentastic is a transportation comparison app

stravamerger. Merges automatically your daily Strava activities (under user-defined conditions)

coinbot. A telegram coin bot to aid in collecting coins

pyacddb. Python parser of ACDDB files (ACDSee)

cpa. The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level. CPA performs OOD predictions of unseen combinations of drugs, learns interpretable embeddings, estimates dose-response curves, and provides uncertainty estimates.

factor_analyzer. Rebuilding factor analysis as described in "The EM algorithm for mixtures of factor analyzers" (Ghahramani and Hinton, 1996)

latex-mimosis. A minimal & modern LaTeX template for your (bachelor's | master's | doctoral) thesis

inventive_spelling. Public repo with code for a computational investigation of the teaching method of inventive spelling (aka "Lesen durch Schreiben") through deep learning

HelveticHighroads. 2026 Project to roadbike the highest points of all swiss cantons