This is your work, valued
I am a scientist who loves biology and mathematics. I have a research team at the University of Toronto.
starcode. All pairs search and sequence clustering
101mmp. MEM mapper prototype
13HMMt. R package for Hidden Markov Models with t emissions
10pubcron. Cron watch of PubMed abstracts
3vtrackR. Version tracking for R production scripts
3oligoz. oligoz primer design
3Rscripts. R scripts for molecular biology
3thegrandlocus. Python
3CodonTransformer2. Codon Transformer 2
2unittest. Unit testing in C
2genomearchitecturelab. Genome Architecture Lab
2cacheperf. Measure cache performance
2drosonorm. R package for Drosophila microarray normalization
2tadbit. Python
2whiplace. Fast multiple string replacement
2genome_structure_and_HIV_integration. R
2blueflower. Python
2cthoop. Cut The Hell Out Of Plasmids
2unf. Multidimensional Test of Uniformity
2rpgrandomsettings. RPG Random Settings
1asmap. Allele-specific mapping
1intentionality. What is this about?
1analytic_combinatorics_seeding. Manuscript on the analytic combinatorics of seeding
1genarchwiki. Genome Architecture Lab Wiki
1neuronal_activity. Use BERT to model neuronal activity
1plasmidcollection. Plasmid Collection for the Genome Architecture Team
1protocols. Laboratory protocols
1miscR. Miscellaneous R scripts
1GRU. Gated Recurrent Unit
1pubmedquery. PubMed Query
1.vim. Vim dotfiles
1thegrandlocus_theme. The Grand Locus Theme
1sesame. Compute MEM seeding probabilities
1drosochip. All out Droso Chip-seq scraper
1aetycoon. aetycoon
1ojournalclub. Open Jounal Club
1sha1digest. SHA1 digest
1thevirtualtoiletseat. The Virtual Toilet Seat
1blobexchange. Exchange files through HTTP
1absolutifyurl. Absolutify URL
1euchronism. Send messages in the future
1signalghost. R package implementing GHOST permutation
1gitsync. Keep installed and development R packages in sync
1pythonscripts. Python scripts for molecular biology
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