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Stockholm

Daniel Lundin

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@erikrikarddaniel

I work with protein evolution and microbial ecology. Nowadays using mostly R/tidyverse, I have a long history in computing involving several tools.

biomakefiles. Library makefiles for various bioinformatic tools.

2

gtdb-trees. R

1

gff2tsv. R script that converts gff files to tsv, splitting the attribute field into separate fields.

1

r-ladies_tunis. Small repo with material from my lecture for R-ladies in Tunis January 2021

1

magmap. Nextflow (nf-core) workflow for mapping reads to large collections of genomes.

1

pfitmap. Ruby

1

environmentmicrobedb. A Ruby on Rails application for microbial diversity data from natural environments

1