Eric Normandeau

Scripts. Collection of various scripts

stacks_workflow. RADseq workflow using STACKS

barque. eDNA metabarcoding pipeline

ncbi_blast_tutorial. Crash course for NCBI blast tools

gawn. Genome Annotation Without Nightmares

go_enrichment. Transcripts annotation and GO enrichment Fisher tests

meditation-timer. Simple meditation timer for Linux

snplift. Transfer coordinates across genomes

mapcomp. Genetic Map Comparison

wgs_sample_preparation. Trim, Align to genome, Deduplicate, Realign WGS sequencing samples

slurm_cheatsheet. Some useful commands to interact with the SLURM job scheduler

github_tutorial. Introduction to Git and GitHub

intro_R_2018. Formation à distance d'introduction à R

python_exercises. A set of Python3 exercises to develop solid scripting foundations

coelopa_fastsim. Coelopa inversion selection simulation in Rust

bwa-meth_pipeline. WGBS pipeline using bwa-meth and MethylDackel

club_bioinfo_ibis. Club de Programmation de l'IBIS

tmux_cheatsheet. Useful tmux infos, commands and config

grinder_simulations. Framework to create in silico eDNA samples

headcopy. Improve cw (morse code) head copying speed

introR_2020. Formation à distance d'introduction à R - Édition 2020

gtseq_scripts. Main scripts used to design GTseq panels for three salmonid species

intro_R. Formation à distance d'introduction à R

space_is_money. Tools to manage disk space usage on *NIX systems