Wout Bittremieux

TCR-Classifier. Classifier to determine CD8+ T-cell receptor characteristics underlying peptide recognition.

komidabot. A Slack chat bot to request the daily menu at the komida restaurants of the University of Antwerp.

gnps_suspect_library. Nearest neighbor suspect spectral library for untargeted metabolomics.

cosine_neutral_loss. Jupyter Notebook

GLEAMS_notebooks. GLEAMS is a Learned Embedding for Annotating Mass Spectra.

feedly-unread. Userscript to place the Feedly unread count in the favicon and title bar

ypic_challenge_2018. YPIC challenge 2018 data analysis

drugs_epidermis. Jupyter Notebook

qc_analysis. Workflow to analyze the quality of mass spectrometry proteomics experiments based on multivariate quality control metrics.

sars_cov_2. Computational analysis of SARS-CoV-2 virus-host protein-protein interactions

iMonDB. Tool suite to automatically extract, store, manage, and visualize mass spectrometer instrument parameters from raw data files.

GNPS_GC. Jupyter Notebook

suspects_inspection.

qc_tools_review. Classifier to evaluate the performance of various types of quality information in discriminating low-quality from high-quality experiments.

falcon_notebooks. Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.

pharmaceuticals_exposure. Jupyter Notebook

crocosphaera_watsonii_wh_8501. Jupyter Notebook

foodomics. Jupyter Notebook

cv. TeX

emp500. Jupyter Notebook

smart-lab. Environment monitoring for mass spectrometry quality control: Towards the smart lab

systemwide_ms. Jupyter Notebook

proteomics_data_mining_challenge. Jupyter Notebook

jqcML. Java API for the standard qcML file format for mass spectrometry quality control data.