This is your work, valued

Boulder, CO

Matt Olm

Elite
@MrOlm

Assistant Professor at the University of Colorado, Boulder

www.colorado.edu/lab/olm

drep. Rapid comparison and dereplication of genomes

350

inStrain. Bioinformatics program inStrain

191

covid19_population_genomics. Analysis of the population diversity of SARS-CoV-2 within and between individual patients

15

tRep. Quickly get the taxonomy of a genome

10

pipeCoverage. Quickly calculate coverage of sequences in a .sam file while retaining breadth information

8

bacterialEvolutionMetrics. Scripts in support of publication

7

drep_instrain_tutorial. Tutorial for dRep and inStrain. Made for EBAME7

5

MIGSeq_code. Code supporting the publication "Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome"

3

VICA. Identifying VIral and Circular content in metAgenomes

3

ZenodoREADME. README for Zenodo archive associated with publication Ultra-deep Sequencing of Hadza Hunter-Gatherers Recovers Vanishing Gut Microbes

2

nf-genomeresolvedmetagenomics. A nextflow pipeline to perform genome resolved metagenomics

2

InfantEukaryotes. Notebooks supporting the publication "Strain-level overlap between infant and hospital fungal microbiomes revealed through de novo assembly of eukaryotic genomes from metagenomes"

2

glrestore. Easily restore objects from AWS glacier from the command line using python

1