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HaploKit

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@HaploKit

Haplotype-aware analysis toolkit for long-read sequencing data

vechat. Correcting errors in noisy long reads using variation graphs

52

Strainline. Full-length de novo viral haplotype reconstruction from noisy long reads

21

DiseaseCapsule. Predicting the prevalence of complex genetic diseases from individual genotype profiles using capsule networks

15

HERO. Hybrid error correction approach for long reads using overlap graph

11

HyLight. HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NGS and 3rd generation sequencing to rapidly and accurately assemble highly complex metagenomic sequencing data.

8

metagenome-asm. Enhancing long read based strain-aware metagenome assembly

2

CrossHyLight. CrossHyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NGS and 3rd generation sequencing to rapidly and accurately assemble highly complex metagenomic sequencing data.

1